org.aisb.bio.tools
Interface FitnessFunction

All Known Implementing Classes:
PSSSMFitnessFunction

public interface FitnessFunction

This interface defines the invocation of a fitness function.

Author:
Doug DeJulio

Method Summary
 int fitness(Sequence seq)
          Calculate the fitness of this sequence.
 

Method Detail

fitness

public int fitness(Sequence seq)
Calculate the fitness of this sequence.

Parameters:
seq - The sequence under consideration.
Returns:
An integer representing the fitness.