HuBMAP Data Portal: A Resource for Multi-Modal Spatial and Single-Cell Data of Healthy Human Tissues

Sat, 01 Nov 2025 00:00:00 +0000

The HuBMAP Data Portal is the public face of the Human BioMolecular Atlas Program — the place where the data actually lands and where the broader research community can access it. This preprint describes the portal’s architecture, capabilities, and current scale.

As of October 2025, the portal holds 5,032 datasets spanning 22 data types across 27 organ classes from 310 donors. That’s not a static archive: it’s a queryable, visualizable, analysis-ready resource.

Data-Portal on icaoberg

HuBMAP Data Portal: A Resource for Multi-Modal Spatial and Single-Cell Data of Healthy Human Tissues