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%% http://bibdesk.sourceforge.net/


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@book{LiuM:98,
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@misc{ImageJ,
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@inproceedings{RubnerTG:98,
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	Date-Added = {2008-05-09 20:48:18 -0400},
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	Year = {2009}}

@article{ChebiraMSPK:09,
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@webpage{SrinivasaFGLK:08:web,
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	Date-Added = {2007-12-15 12:03:04 -0500},
	Date-Modified = {2008-02-22 19:51:29 -0500},
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	Note = Rejected,
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	Booktitle = isbi,
	Date-Added = {2007-12-15 12:00:02 -0500},
	Date-Modified = {2008-02-22 19:51:08 -0500},
	Month = may,
	Note = Rejected,
	Title = {Axon Detection and Tracing in Brightfield and Laser Scanning Microscopy Images},
	Year = {2008}}

@inproceedings{HallockOBRCOMCTK:08,
	Address = paris,
	Author = {C. A. Hallock and I. {\"O}zg{\"u}ne{\c s} and R. Bhagavatula and G. K. Rohde and J. C. Crowley and C. E. Onorato and A. Mavalankar and A. Chebira and C. H. Tan and M. P{\"u}schel and J. Kova{\v c}evi{\'c}},
	Booktitle = isbi,
	Date-Added = {2007-12-15 11:55:24 -0500},
	Date-Modified = {2008-06-10 14:03:22 -0400},
	Month = may,
	Pages = {165-168},
	Title = {Axonal Bouton Modeling, Detection and Distribution Analysis for the Study of Neural Circuit Organization and Plasticity},
	Year = {2008}}

@inproceedings{ChebiraOCJGBKONSOBSRK:08,
	Address = paris,
	Author = {A. Chebira and J. A. Ozolek and C. A. Castro and W. G. Jenkinson and M. Gore and R. Bhagavatula and I. Khaimovich and S. E. Ormon and C. S. Navara and M. Sukhwani and K. E. Orwig and A. Ben-Yehudah and G. Schatten and G. K. Rohde and J. Kova{\v c}evi{\'c}},
	Booktitle = isbi,
	Date-Added = {2007-12-15 11:50:52 -0500},
	Date-Modified = {2008-05-22 11:31:12 -0400},
	Month = may,
	Pages = {979-982},
	Title = {Multiresolution Identification of Germ Layer Components in Teratomas Derived from Human and Nonhuman Primate Embryonic Stem Cells},
	Year = {2008}}

@inproceedings{SrinivasaFGHGLK:08,
	Address = paris,
	Author = {G. Srinivasa and M. C. Fickus and M. N. Gonzales-Rivero and S. Yichia Hsieh and Y. Guo and A. D. Linstedt and J. Kova{\v c}evi{\'c}},
	Booktitle = isbi,
	Date-Added = {2007-12-15 11:37:42 -0500},
	Date-Modified = {2008-05-22 11:31:30 -0400},
	Month = may,
	Pages = {348-351},
	Title = {Active Mask Segmentation for the Cell-Volume Computation and {G}olgi-body Segmentation of {HeLa} Cell Images},
	Year = {2008}}

@inproceedings{SchmidtL:07,
	Author = {A. Schmidt and H. Lambert},
	Booktitle = sens,
	Date-Added = {2007-12-15 11:24:44 -0500},
	Date-Modified = {2007-12-15 11:29:05 -0500},
	Month = jun,
	Title = {A Multi-Target Smoothing Algorithm for Improving Track Estimates},
	Year = {2007}}

@article{Munkres:57,
	Author = {J. Munkres},
	Date-Added = {2007-12-15 11:22:13 -0500},
	Date-Modified = {2007-12-15 11:23:50 -0500},
	Journal = siam,
	Month = mar,
	Number = {1},
	Title = {Algorithms for Assignment and Transportation Problems},
	Volume = {5},
	Year = {1957}}

@book{BlackmanP:99,
	Address = norwood,
	Author = {S. Blackman and R. Popoli},
	Date-Added = {2007-12-15 11:19:08 -0500},
	Date-Modified = {2007-12-15 11:20:17 -0500},
	Publisher = artech,
	Title = {Design and Analysis of Modern Tracking Systems},
	Year = {1999}}

@article{KalmanB:61,
	Author = {R. E. Kalman and R. S. Bucy},
	Date-Added = {2007-12-15 11:16:36 -0500},
	Date-Modified = {2007-12-15 11:18:23 -0500},
	Journal = asme,
	Pages = {95-108},
	Title = {New results in linear filtering and prediction theory},
	Year = {1962}}

@article{HeHCHPSTR:03,
	Author = {W. He and T. A.  Hamilton and A. R.  Cohen and T. J.  Holmes and C.  Pace and D. H.  Szarowski and J. N. Turner and B.  Roysam},
	Date-Added = {2007-12-15 11:11:12 -0500},
	Date-Modified = {2008-01-07 21:42:03 -0500},
	Journal = micro,
	Pages = {296-310},
	Title = {Automated Three-Dimensional Tracing of Neurons in Confocal and Brightfield Images},
	Volume = {9},
	Year = {2003}}

@inproceedings{SmalNM:07,
	Author = {I. Smal and W. Niessen and E. Meijering},
	Booktitle = isbi,
	Date-Added = {2007-12-15 11:07:06 -0500},
	Date-Modified = {2007-12-15 11:08:41 -0500},
	Month = apr,
	Title = {Advanced Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images},
	Year = {2007}}

@inproceedings{MeijeringJSU:03,
	Address = honolulu,
	Author = {E. Meijering and M. Jacob and J.-C. Sarria and M. Unser},
	Booktitle = iasted,
	Date-Added = {2007-12-15 10:54:41 -0500},
	Date-Modified = {2007-12-15 11:03:17 -0500},
	Pages = {491-495},
	Title = {A Novel Approach to Neurite Tracing in Fluorescence Microscopy Images},
	Year = {2003}}

@article{MizrahiCSK:04,
	Author = {A. Mizrahi and J. C. Crowley and E. Shtoyerman and L. Katz},
	Date-Added = {2007-12-15 10:42:51 -0500},
	Date-Modified = {2007-12-15 14:24:48 -0500},
	Journal = neurosci,
	Month = mar,
	Number = {13},
	Pages = {3147-3151},
	Title = {High resolution \emph{in vivo} imaging of hippocampal dendrites and spines},
	Volume = {24},
	Year = {2004}}

@article{OgawaAAB:97,
	Author = {T. Ogawa and J. M. Ar{\'e}chaga and M. R. Avarbock and R. L. Brinster},
	Date-Added = {2007-12-14 08:28:24 -0500},
	Date-Modified = {2007-12-14 08:30:17 -0500},
	Journal = {Int. J. Dev. Biol.},
	Pages = {111-122},
	Title = {Transplantation of testis germinal cells into mouse seminiferous tubules},
	Volume = {41},
	Year = {1997}}

@article{NavaraMRBJK:07,
	Author = {C. S. Navara and J. D. Mich-Basso and C. J. Redinger and A. Ben-Yehudah and E. Jacoby and E. Kovkarova-Naumovski and {et al.}},
	Date-Added = {2007-12-14 08:24:29 -0500},
	Date-Modified = {2007-12-14 08:27:30 -0500},
	Journal = {Stem Cells},
	Pages = {2695-2704},
	Title = {Pedigreed primate embryonic stem cells express homogeneous familial gene profiles},
	Volume = {25},
	Year = {2007}}

@inproceedings{KarlssonVK:88,
	Address = cambridge,
	Author = {G. Karlsson and M. Vetterli and J. Kova{\v c}evi{\'c}},
	Booktitle = spie,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = nov,
	Pages = {187-199},
	Title = {Nonseparable Two-Dimensional Perfect Reconstruction Filter Banks},
	Year = 1988}

@inproceedings{KovacevicLV:89,
	Address = glasgow,
	Author = {J. Kova{\v c}evi{\'c} and D. J. LeGall and M. Vetterli},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = may,
	Pages = {1949-1952},
	Title = {Image coding with windowed modulated filter banks},
	Year = 1989}

@inproceedings{KovacevicV:89,
	Address = phil,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = spie,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = nov,
	Pages = {1258-1268},
	Title = {Perfect Reconstruction Filter Banks with Rational Sampling Rates in One and Two Dimensions},
	Year = 1989}

@inproceedings{VetterliKL:89,
	Address = torino,
	Author = {M. Vetterli and J. Kova{\v c}evi{\'c} and D. J. LeGall},
	Booktitle = hdtv,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = sep,
	Note = {Reprinted in {\it Signal Processing of HDTV, {II}}, L. Chiariglione ed., North-Holland, Amsterdam, pp. 141-148, 1990},
	Title = {Perfect Reconstruction Filter Banks for {HDTV} Representation and Coding},
	Year = 1989}

@book{Kovacevic:89,
	Author = {J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Edition = {Fourth},
	Note = {Accompanies {\it Information Transmission, Modulation and Noise} by M. Schwartz},
	Publisher = mgh,
	Title = {Solutions Manual},
	Year = 1989}

@inproceedings{KovacevicVK:90,
	Address = newor,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli and G. Karlsson},
	Booktitle = iscas,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = may,
	Pages = {2004-2008},
	Title = {Design of multidimensional filter banks for nonseparable sampling},
	Year = 1990}

@article{VetterliKL:90,
	Author = {M. Vetterli and J. Kova{\v c}evi{\'c} and D. J. LeGall},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = icjhdtv,
	Month = oct,
	Number = 3,
	Pages = {349-364},
	Title = {Perfect Reconstruction Filter Banks for {HDTV} Representation and Coding},
	Volume = 2,
	Year = 1990}

@inbook{VetterliKL:90a,
	Author = {M. Vetterli and J. Kova{\v c}evi{\'c} and D. J. LeGall},
	Chapter = {Perfect Reconstruction Filter Banks for {HDTV} Representation and Coding},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Editor = {L. Chiariglione},
	Publisher = els,
	Title = {Signal Processing of {HDTV}},
	Year = 1990}

@article{KovacevicV:91a,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = info,
	Month = may,
	Number = 3,
	Pages = {695-698},
	Title = {The commutativity of up/downsampling in two dimensions},
	Volume = 37,
	Year = 1991}

@inproceedings{KovacevicV:91b,
	Address = toronto,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = may,
	Pages = {1785-1788},
	Title = {Perfect Reconstruction Filter Banks With Rational Sampling Rate Changes},
	Year = 1991}

@inproceedings{KovacevicV:91c,
	Address = lakeplacid,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = imdsp,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = sep,
	Pages = {3.12},
	Title = {Nonseparable Multidimensional Perfect Reconstruction Filter Banks and Wavelet Bases},
	Year = 1991}

@phdthesis{Kovacevic:91,
	Author = {J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	School = ucol,
	Title = {Filter Banks and Wavelets: Extensions and Applications},
	Year = 1991}

@inproceedings{KovacevicV:92b,
	Address = sf,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = mar,
	Pages = {IV:389-392},
	Title = {Design Of Multidimensional Nonseparable Regular Filter Banks And Wavelets},
	Year = 1992}

@inproceedings{VetterliK:92,
	Address = chicago,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = {Proc. Int. Symp. Fundamentals of Discrete-Time Syst. (A Tribute to Professor Eliahu I. Jury)},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = jun,
	Pages = {317-324},
	Publisher = tsi,
	Title = {From discrete to continuous time: {C}onstruction of wavelets based on filter banks},
	Year = 1992}

@inproceedings{HerleyKRV:92,
	Address = victoria,
	Author = {C. Herley and J. Kova{\v c}evi{\'c} and K. Ramchandran and M. Vetterli},
	Booktitle = tfts,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = oct,
	Pages = {11-14},
	Title = {Arbitrary Orthogonal Tilings of the Time-Frequency Plane},
	Year = 1992}

@article{KovacevicV:93a,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = improc,
	Month = jan,
	Number = 1,
	Pages = {118-122},
	Title = {{FCO} Sampling of Digital Video Using Perfect Reconstruction Filter Banks},
	Volume = 2,
	Year = 1993}

@inproceedings{Kovacevic:93a,
	Address = snowbird,
	Author = {J. Kova{\v c}evi{\'c}},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = mar,
	Pages = 486,
	Title = {Subband Coding Systems Incorporating Quantizer Models},
	Year = 1993}

@inproceedings{HerleyKRV:93a,
	Address = minneapolis,
	Author = {C. Herley and J. Kova{\v c}evi{\'c} and K. Ramchandran and M. Vetterli},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = apr,
	Pages = {205-208},
	Title = {Time-varying orthonormal tilings of the time-frequency plane},
	Volume = {III},
	Year = 1993}

@inproceedings{KovacevicV:93b,
	Address = chicago,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = iscas,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = may,
	Pages = {108-111},
	Title = {New results on multidimensional filter banks and wavelets},
	Volume = {I},
	Year = 1993}

@article{KovacevicV:93c,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = asp,
	Month = jun,
	Number = 6,
	Pages = {2047-2066},
	Title = {Perfect Reconstruction Filter Banks With Rational Sampling Factors},
	Volume = 41,
	Year = 1993}

@inproceedings{Kovacevic:93b,
	Address = cannes,
	Author = {J. Kova{\v c}evi{\'c}},
	Booktitle = imdsp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = sep,
	Pages = {76-77},
	Title = {Eliminating correlated errors in subband coding systems with quantization},
	Year = 1993}

@inproceedings{KovacevicV:93d,
	Address = cannes,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = imdsp,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = sep,
	Pages = {150-151},
	Title = {Nonseparable Two-Dimensional Orthogonal Wavelets with Symmetries},
	Year = 1993}

@inproceedings{HerleyK:93,
	Address = pacgrove,
	Author = {C. Herley and J. Kova{\v c}evi{\'c}},
	Booktitle = asilomar,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = nov,
	Pages = {60-64},
	Title = {Spatially-Varying Two-Dimensional Filter Banks},
	Year = 1993}

@inproceedings{Kovacevic:93c,
	Address = pacgrove,
	Author = {J. Kova{\v c}evi{\'c}},
	Booktitle = asilomar,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = nov,
	Pages = {881-885},
	Title = {Eliminating correlated errors in subband/wavelet coding systems with quantization},
	Year = 1993}

@inproceedings{KovacevicV:93e,
	Address = pacgrove,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = asilomar,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = nov,
	Pages = {481-485},
	Title = {Time-Varying Modulated Lapped Transforms},
	Year = 1993}

@article{HerleyKRV:93b,
	Author = {C. Herley and J. Kova{\v c}evi{\'c} and K. Ramchandran and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = aspwav,
	Month = dec,
	Number = 12,
	Pages = {3341-3359},
	Title = {Tilings of the Time-Frequency Plane: {C}onstruction of Arbitrary Orthogonal Bases and Fast Tiling Algorithms},
	Volume = 41,
	Year = 1993}

@inbook{HerleyKV:94,
	Author = {C. Herley and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Chapter = {Wavelets, Filter Banks, and Arbitrary Tilings of the Time-Frequency Plane},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Editor = {A. Bojanczyk and G. Cybenko},
	Publisher = sv,
	Title = {Linear Algebra for Signal Processing},
	Volume = 69,
	Year = 1995}

@book{VetterliK:95,
	Address = englewood,
	Author = {M. Vetterli and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2008-03-15 19:48:01 -0400},
	Note = {http://waveletsandsubbandcoding.org/},
	Publisher = prenticehall,
	Series = {Signal Processing},
	Title = {Wavelets and Subband Coding},
	Url = {http://waveletsandsubbandcoding.org/},
	Year = 1995,
	Bdsk-Url-1 = {http://waveletsandsubbandcoding.org/}}

@article{Kovacevic:94,
	Author = {J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Feb. 6,},
	Note = {\#5,490,233},
	Title = {Method and apparatus for reducing correlated errors in subband coding systems with quantizers},
	Year = 1996}

@inproceedings{Kovacevic:95a,
	Address = detroit,
	Author = {J. Kova{\v c}evi{\'c}},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = may,
	Pages = {2125-2128},
	Title = {Local cosine bases in two dimensions},
	Year = 1995}

@article{Kovacevic:95b,
	Author = {J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = improc,
	Month = may,
	Number = 5,
	Pages = {543-553},
	Title = {Subband Coding Systems Incorporating Quantizer Models},
	Volume = 4,
	Year = 1995}

@inbook{Kovacevic:95c,
	Author = {J. Kova{\v c}evi{\'c}},
	Chapter = {z-Transform},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Editor = {{W. K.} Chen},
	Month = jun,
	Note = {Second ed., 2002, third ed., 2006},
	Publisher = crc,
	Title = {Handbook of Circuits and Filters},
	Year = 1995}

@inproceedings{BernardiniK:95a,
	Address = dc,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Booktitle = icip,
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = oct,
	Pages = {580-583},
	Title = {Local Orthogonal Bases},
	Volume = {III},
	Year = 1995}

@article{BernardiniK:95b,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Journal = msspwav,
	Month = jul,
	Note = {Reprinted in {\it Multidimensional Filter Banks and Wavelets}, S. Basu and B. Levy eds., Kluwer Academic Publishers, 1997},
	Number = 4,
	Pages = {331-370},
	Title = {Local Orthogonal Bases {I}: {C}onstruction},
	Volume = 7,
	Year = 1996}

@article{BernardiniK:95c,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Journal = msspwav,
	Month = jul,
	Note = {Reprinted in {\it Multidimensional Filter Banks and Wavelets}, S. Basu and B. Levy eds., Kluwer Academic Publishers, 1997},
	Number = 4,
	Pages = {371-400},
	Title = {Local Orthogonal Bases {II}: {W}indow design},
	Volume = 7,
	Year = 1996}

@inproceedings{KovacevicSY:95a,
	Address = snowbird,
	Author = {J. Kova{\v c}evi{\'c} and R. J. Safranek and E. M. Yeh},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = mar,
	Pages = 446,
	Title = {Adaptive Bidirectional Time-Recursive Interpolation for Deinterlacing},
	Year = 1995}

@inproceedings{Kovacevic:95d,
	Address = dc,
	Author = {J. Kova{\v c}evi{\'c}},
	Booktitle = infosymp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = may,
	Pages = {377-378},
	Title = {Recent advances in image communications: {M}ultiresolution techniques and wavelets},
	Year = 1995}

@article{KovacevicV:95,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = asp,
	Month = may,
	Number = 5,
	Pages = {1269-1273},
	Title = {Nonseparable Two- and Three-Dimensional Wavelets},
	Volume = 43,
	Year = 1995}

@article{KovacevicB:95a,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {May 19,},
	Note = {\#5,754,794},
	Title = {Subband coding using local bases in multiple dimensions},
	Year = 1998}

@article{KovacevicB:95b,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Sep. 7,},
	Note = {\#5,950,151},
	Title = {Method for implementing non-uniform filters},
	Year = 1999}

@article{KovacevicSY:97,
	Author = {J. Kova{\v c}evi{\'c} and R. J. Safranek and E. M. Yeh},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = improc,
	Month = feb,
	Number = 2,
	Pages = {339-344},
	Title = {Deinterlacing by successive approximation},
	Volume = 6,
	Year = 1997}

@article{Kovacevic:97,
	Author = {J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = improc,
	Month = nov,
	Number = 11,
	Pages = {1580-1583},
	Title = {Local cosine bases in two dimensions},
	Volume = 6,
	Year = 1997}

@article{KovacevicC:96,
	Author = {A. Cohen and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = ieee,
	Month = apr,
	Number = 4,
	Pages = {514-522},
	Title = {Wavelets: {A} Mathematical Background},
	Volume = 84,
	Year = 1996}

@article{KovacevicSY:96,
	Author = {J. Kova{\v c}evi{\'c} and R. J. Safranek and E. M. Yeh},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = patent,
	Month = {Aug. 26,},
	Note = {\#5,661,525},
	Title = {Method and apparatus for converting an interlaced video frame sequence into a progressively scanned sequence},
	Year = 1997}

@inproceedings{BernardiniK:96a,
	Address = belize,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Booktitle = imdsp,
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = mar,
	Pages = {42-43},
	Title = {Designing local orthogonal bases for evaluating image quality},
	Year = 1996}

@inproceedings{BernardiniK:96b,
	Address = atlanta,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = may,
	Pages = {2349-2352},
	Title = {Local bases yielding arbitrary tilings of the time-frequency plane},
	Year = 1996}

@article{BernardiniK:96c,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2009-04-09 09:39:45 -0400},
	Journal = jfaa,
	Month = sep,
	Number = 1,
	Pages = {1-23},
	Title = {Designing local orthogonal bases on finite groups {I}: {A}belian case},
	Volume = 6,
	Year = 2000}

@article{BernardiniK:96c.2,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2009-04-09 09:39:52 -0400},
	Journal = jfaa,
	Month = sep,
	Number = 2,
	Pages = {207-231},
	Title = {Designing local orthogonal bases on finite groups {II}: {N}onabelian case},
	Volume = 6,
	Year = 2000}

@article{BernardiniK:96d,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Journal = asp,
	Month = aug,
	Number = 8,
	Pages = {2293-2304},
	Title = {Arbitrary tilings of the time-frequency plane using local bases},
	Volume = 47,
	Year = 1999}

@inproceedings{KovacevicB:96a,
	Address = snowbird,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = apr,
	Pages = {369-378},
	Title = {Arbitrary Tilings of the Time-Frequency Plane Using Local Bases},
	Year = 1996}

@inproceedings{KovacevicB:96b,
	Address = princeton,
	Author = {J. Kova{\v c}evi{\'c} and R. Bernardini},
	Booktitle = ciss,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = mar,
	Title = {Local bases and applications},
	Year = 1996}

@inproceedings{BernardiniK:96f,
	Address = lausanne,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Booktitle = icip,
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = sep,
	Pages = {577-560},
	Title = {Designing local orthogonal bases for evaluating image quality},
	Volume = {I},
	Year = 1996}

@inbook{KovacevicB:97a,
	Author = {J. Kova{\v c}evi{\'c} and R. Bernardini},
	Chapter = {Local Bases: {T}heory and Applications},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Editor = {G. Deslauriers and S. Dubuc},
	Publisher = {AMS CRM Proc. and Lecture notes},
	Title = {Spline Functions and Theory of Wavelets},
	Volume = 18,
	Year = 1999}

@inproceedings{BernardiniK:97b,
	Address = snowbird,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = mar,
	Pages = 424,
	Title = {Orthonormal sets of filters obtained my modulations and rotations of a prototype},
	Year = 1997}

@inproceedings{BernardiniK:97c,
	Address = budapest,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Booktitle = ecctd,
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = sep,
	Title = {Filter Design on the Group of Modulations and Rotations},
	Year = 1997}

@inproceedings{NgK:97a,
	Address = sbarbara,
	Author = {F. M. Ng and J. Kova{\v c}evi{\'c}},
	Booktitle = icip,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = oct,
	Title = {Nonredundant image representations},
	Year = 1997}

@article{NgK:97c,
	Author = {J. Kova{\v c}evi{\'c} and F. M. Ng},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = patent,
	Month = {Oct. 9,},
	Note = {\#6,301,222},
	Title = {Signal data transmission over lossy packet networks},
	Year = 2001}

@inproceedings{KovacevicS:97a,
	Address = sandiego,
	Author = {J. Kova{\v c}evi{\'c} and W. Sweldens},
	Booktitle = spie,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = jul,
	Title = {Multidimensional interpolating filter banks and wavelets},
	Year = 1997}

@article{KovacevicS:97b,
	Author = {J. Kova{\v c}evi{\'c} and W. Sweldens},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = improc,
	Month = mar,
	Number = 3,
	Pages = {480-496},
	Title = {Wavelet Families of Increasing Order in Arbitrary Dimensions},
	Volume = 9,
	Year = 2000}

@article{KovacevicS:97c,
	Author = {J. Kova{\v c}evi{\'c} and W. Sweldens},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Jan. 25,},
	Note = {\#6,018,753},
	Title = {Interpolating Filter Banks In Arbitrary Dimensions},
	Year = 2000}

@inbook{BernardiniK:97d,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Chapter = {Local Orthogonal Bases {I}: {C}onstruction},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Editor = {S. Basu and B. Levy},
	Publisher = kluwer,
	Title = {Multidimensional Filter Banks and Wavelets},
	Year = 1997}

@inbook{BernardiniK:97e,
	Author = {R. Bernardini and J. Kova{\v c}evi{\'c}},
	Chapter = {Local Orthogonal Bases {II}: {W}indow design},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Editor = {S. Basu and B. Levy},
	Publisher = kluwer,
	Title = {Multidimensional Filter Banks and Wavelets},
	Year = 1997}

@inproceedings{MojsilovicKP:97,
	Address = belgrade,
	Author = {A. Mojsilovi{\'c} and J. Kova{\v c}evi{\'c} and M. Popovi{\'c}},
	Booktitle = neurel,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = sep,
	Title = {Transform Based Method for the Design of Hexagonal Activation Functions for the Wavelet Neural Networks},
	Year = 1997}

@inproceedings{GoyalK:98,
	Address = snowbird,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c}},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = mar,
	Pages = {388-397},
	Title = {Optimal multiple description transform coding of {G}aussian vectors},
	Year = 1998}

@inproceedings{GoyalKV:98,
	Address = cambridge,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = isit,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = aug,
	Title = {Multiple description transform coding: {R}obustness to erasures using tight frame expansions},
	Year = 1998}

@article{GirodGKV:98,
	Author = {B. Girod and R. M. Gray and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = aspmag,
	Month = mar,
	Pages = {40-46},
	Title = {Image and Video Coding},
	Volume = 2,
	Year = 1998}

@article{KovacevicV:98,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = aspmag,
	Month = mar,
	Pages = {28-29},
	Title = {Image Transforms},
	Volume = 2,
	Year = 1998}

@inproceedings{ChenevalBPKV:98,
	Address = seattle,
	Author = {Y. Cheneval and L. Balmelli and P. Prandoni and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = may,
	Pages = {2349-2352},
	Title = {Interactive {DSP} education using {J}ava},
	Year = 1998}

@article{GoyalK:98a,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Feb. 5,},
	Note = {\#6,345,125},
	Title = {Method description for transform coding using optimal transforms of arbitrary dimensions},
	Year = 2002}

@article{KovacevicN:98,
	Author = {J. Kova{\v c}evi{\'c} and F. M. Ng},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Apr. 10,},
	Note = {\#6,215,787},
	Title = {Signal data processing using equal importance packetization},
	Year = 2001}

@article{AreanGK:98,
	Author = {R. Arean and V. K Goyal and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Journal = patent,
	Month = {Jun. 26,},
	Note = {\#6,253,185},
	Title = {Method Of Multiple Description Transform Coding Of Audio Signals},
	Year = 2001}

@article{GoyalKV:98b,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Dec. 11,},
	Note = {\#6,330,370},
	Title = {Multiple Description Transform Coding Of Images Using Optimal Transforms of Arbitrary Dimensions},
	Year = 2001}

@inproceedings{GoyalKAV:98,
	Address = chicago,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c} and R. Arean and M. Vetterli},
	Booktitle = icip,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = oct,
	Pages = {2349-2352},
	Title = {Multiple Description Transform Coding Of Images},
	Year = 1998}

@inproceedings{KovacevicG:98,
	Address = ischia,
	Author = {J. Kova{\v c}evi{\'c} and V. K Goyal},
	Booktitle = mmwork,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = sep,
	Pages = {2349-2352},
	Title = {Multiple Description Coding for Communications},
	Year = 1998}

@inproceedings{GoyalKV:98a,
	Address = ticino,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = wavwork,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = sep,
	Pages = {2349-2352},
	Title = {Quantized Frame Expansions as Source-Channel Codes for Erasure Channels},
	Year = 1998}

@inproceedings{MojsilovicKK:99,
	Address = sandiego,
	Author = {A. Mojsilovi{\'c} and J. Kova{\v c}evi{\'c} and D. A. Kall},
	Booktitle = spie,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = feb,
	Title = {Extraction of Perceptually Based Texture Features Using Wavelet Decomposition},
	Year = 1999}

@article{GoyalK:98b,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = info,
	Month = sep,
	Number = 6,
	Pages = {2199-2224},
	Title = {Generalized multiple description coding with correlated transforms},
	Volume = 47,
	Year = 2001}

@article{AreanKG:98,
	Author = {R. Arean and J. Kova{\v c}evi{\'c} and V. K Goyal},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Journal = sap,
	Month = mar,
	Number = 2,
	Pages = {140-145},
	Title = {Multiple Description Perceptual Audio Coding with Correlated Transforms},
	Volume = 8,
	Year = 2000}

@article{MojsilovicKKSG:98,
	Author = {A. Mojsilovi{\'c} and J. Kova{\v c}evi{\'c} and D. A. Kall and R. J. Safranek and K. Ganapathy},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = improc,
	Month = mar,
	Number = 3,
	Pages = {417-431},
	Title = {Vocabulary and grammar of color patterns},
	Volume = 9,
	Year = 2000}

@article{MojsilovicKHSG:98,
	Author = {A. Mojsilovi{\'c} and J. Kova{\v c}evi{\'c} and J. Hu and R. J. Safranek and K. Ganapathy},
	Date-Modified = {2009-04-09 09:47:08 -0400},
	Journal = improcdiglib,
	Month = jan,
	Note = {IEEE Signal Processing Society Young Author Best Paper Award.},
	Number = 1,
	Pages = {38-54},
	Title = {Matching and retrieval based on the vocabulary and grammar of color patterns},
	Volume = 9,
	Year = 2000}

@inproceedings{MojsilovicKHSG:99,
	Address = florence,
	Author = {A. Mojsilovi{\'c} and J. Kova{\v c}evi{\'c} and J. Hu and R. J. Safranek and K. Ganapathy},
	Booktitle = mmcs,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = jun,
	Title = {Matching and retrieval based on the vocabulary and grammar of color patterns},
	Year = 1999}

@inproceedings{GoyalK:99,
	Address = snowbird,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = mar,
	Pages = {388-397},
	Title = {Quantized Frame Expansions as Source-Channel Codes for Erasure Channels},
	Year = 1999}

@inproceedings{BalmelliKV:99,
	Address = kobe,
	Author = {L. Balmelli and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = icip,
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = oct,
	Pages = {2349-2352},
	Title = {Quadtrees for embedded surface visualization: {C}onstraints and efficient data structures},
	Year = 1999}

@article{MojsilovicKHSG:99a,
	Author = {K. Ganapathy and J. Hu and J. Kova{\v c}evi{\'c} and A. Mojsilovi{\'c} and R. J. Safranek},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = patent,
	Month = {Jun. 25,},
	Note = {\#6,411,953},
	Title = {Retrieval and matching og color patterns based on a predetermined vocabulary and grammar},
	Year = 2002}

@article{KovacevicS:99,
	Author = {J. Kova{\v c}evi{\'c} and W. Sweldens},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = patent,
	Month = {Jun. 19,},
	Note = {\#6,249,797},
	Title = {Interpolating Filter Banks In Arbitrary Dimensions {II}},
	Year = 2001}

@article{BalmelliKV:99a,
	Author = {L. Balmelli and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Journal = patent,
	Month = {Feb. 25,},
	Note = {\#6,526,176},
	Title = {Efficient processing of quadtree data},
	Year = 2003}

@inproceedings{BalmelliKV:99b,
	Address = erlangen,
	Author = {L. Balmelli and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = {Proc. Workshop Vision, Modelling and Visualization},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Month = nov,
	Pages = {2349-2352},
	Title = {Solving the coplanarity problem of regular embedded triangulations},
	Year = 1999}

@inbook{Kovacevic:99,
	Author = {J. Kova{\v c}evi{\'c}},
	Chapter = {z-Transform},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Editor = {{W. K.} Chen},
	Month = jun,
	Publisher = crc,
	Title = {Mathematics for Circuits and Filters},
	Year = 1999}

@inproceedings{KelnerGK:00,
	Address = snowbird,
	Author = {J. A. Kelner and V. K Goyal and J. Kova{\v c}evi{\'c}},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = mar,
	Pages = {480-489},
	Title = {Multiple Description Lattice Vector Quantization: Variations and Extensions},
	Year = 2000}

@article{KelnerGK:00b,
	Author = {J. A. Kelner and V. K Goyal and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Jul. 15,},
	Note = {\#6,594,627},
	Title = {Methods and Apparatus for Lattice-Structured Multiple Description Vector Quantization Coding},
	Year = 2003}

@article{BalmelliKV:00,
	Author = {L. Balmelli and J. Kova{\v c}evi{\'c} and M. Vetterli},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Journal = ieeetrvis,
	Title = {Progressive meshes in the operational rate-distortion sense},
	Year = 2000}

@book{VetterliKG:09,
	Author = {M. Vetterli and J. Kova{\v c}evi{\'c} and V. K Goyal},
	Date-Modified = {2009-04-09 13:07:23 -0400},
	Publisher = {http://www.fourierandwavelets.org/},
	Title = {The World of Fourier and Wavelets: Theory, Algorithms and Applications},
	Url = {http://www.fourierandwavelets.org/},
	Year = {2009},
	Bdsk-Url-1 = {http://www.fourierandwavelets.org/}}

@article{GoyalK:01,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c} and J. A. Kelner},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = acha,
	Month = may,
	Number = 3,
	Pages = {203-233},
	Title = {Quantized frame expansions with erasures},
	Volume = 10,
	Year = 2001}

@article{GoyalKK:01,
	Author = {V. K Goyal and J. A. Kelner and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2009-04-09 09:38:43 -0400},
	Journal = info,
	Month = mar,
	Note = {Top-10 cited article since the inception of the journal.},
	Number = 3,
	Pages = {781-788},
	Title = {Multiple Description Vector Quantization with a Coarse Lattice},
	Volume = 48,
	Year = 2002}

@article{GoyalKM:00,
	Author = {V. K Goyal and J. Kova{\v c}evi{\'c} and F. Masson},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Jan. 3,},
	Note = {\#6,983,243},
	Title = {Methods and Apparatus for Wireless Transmission Using Multiple Description Coding},
	Year = 2006}

@inproceedings{DragottiKG:01,
	Address = snowbird,
	Author = {P. L. Dragotti and J. Kova{\v c}evi{\'c} and V. K Goyal},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = mar,
	Pages = {173-182},
	Title = {Quantized Oversampled Filter Banks with Erasures},
	Year = 2001}

@article{KovacevicS:01,
	Author = {J. Kova{\v c}evi{\'c} and W. Sweldens},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = patent,
	Month = {Mar. 8,},
	Note = {\#6,865,587},
	Title = {Interpolating Filter Banks In Arbitrary Dimensions {III}},
	Year = 2005}

@article{KovacevicDG:02,
	Author = {J. Kova{\v c}evi{\'c} and P. L. Dragotti and V. K Goyal},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = infowyner,
	Month = jun,
	Number = 6,
	Pages = {1439-1450},
	Title = {Filter bank frame expansions with erasures},
	Volume = 48,
	Year = 2002}

@inproceedings{CasazzaK:01,
	Address = sandiego,
	Author = {P. G. Casazza and J. Kova{\v c}evi{\'c}},
	Booktitle = spiew,
	Date-Modified = {2007-10-25 19:47:12 -0400},
	Month = jul,
	Pages = {512-521},
	Title = {Uniform tight frames for signal processing and communications},
	Year = 2001}

@article{MojsilovicKHSG:01,
	Author = {K. Ganapathy and J. Hu and J. Kova{\v c}evi{\'c} and A. Mojsilovi{\'c} and R. J. Safranek},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = patent,
	Month = {Nov. 26,},
	Note = {\#6,487,554},
	Title = {Retrieval and matching of color patterns based on a predetermined vocabulary and grammar: {II}},
	Year = 2002}

@article{CasazzaK:02,
	Author = {P. G. Casazza and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:47:12 -0400},
	Journal = advcompmathframes,
	Pages = {387-430},
	Title = {Equal-norm tight frames with erasures},
	Volume = 18,
	Year = 2002}

@article{SchullerKMG:02,
	Author = {G. Schuller and J. Kova{\v c}evi{\'c} and F. Masson and V. K Goyal},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = sap,
	Month = sep,
	Number = 5,
	Pages = {1014-1024},
	Title = {Robust Low-Delay Audio Coding Using Multiple Descriptions},
	Volume = 13,
	Year = 2005}

@inproceedings{LozanoKA:02,
	Address = snowbird,
	Author = {A. Lozano and J. Kova{\v c}evi{\'c} and M. Andrews},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = mar,
	Title = {Quantized frame expansions in a wireless environment},
	Year = 2002}

@inproceedings{LozanoKA:02a,
	Address = rutgers,
	Author = {A. Lozano and J. Kova{\v c}evi{\'c} and M. Andrews},
	Booktitle = dimacssc,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = may,
	Title = {Quantized frame expansions in a wireless environment},
	Year = 2002}

@inbook{CasazzaFKLT:06,
	Address = boston,
	Author = {P. G. Casazza and M. C. Fickus and J. Kova{\v c}evi{\'c} and M. Leon and J. C. Tremain},
	Chapter = {A Physical Interpretation for Finite Tight Frames},
	Date-Modified = {2007-10-25 19:44:47 -0400},
	Pages = {51-76},
	Publisher = birk,
	Title = {Harmonic Analysis and Applications},
	Year = {2006}}

@article{MojsilovicKHSG:02,
	Author = {K. Ganapathy and J. Hu and J. Kova{\v c}evi{\'c} and A. Mojsilovi{\'c} and R. J. Safranek},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = patent,
	Month = {May 4,},
	Note = {\#6,732,119},
	Title = {Retrieval and matching og color patterns based on a predetermined vocabulary and grammar: {III}},
	Year = 2004}

@inproceedings{ZhouDK:03,
	Address = sandiego,
	Author = {J. Zhou and M. N. Do and J. Kova{\v c}evi{\'c}},
	Booktitle = spiew,
	Date-Modified = {2007-10-25 19:47:12 -0400},
	Month = jul,
	Title = {New design of orthogonal {FIR} filter banks using the {C}ayley transform},
	Year = 2003}

@article{ZhouDK:04,
	Author = {J. Zhou and M. N. Do and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = improc,
	Month = jun,
	Number = {6},
	Pages = {760-769},
	Title = {Multidimensional orthogonal filter bank characterization and design using the {C}ayley transform},
	Volume = {14},
	Year = {2005}}

@article{ZhouDK:04a,
	Author = {J. Zhou and M. N. Do and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = improc,
	Month = feb,
	Number = {2},
	Pages = {511-519},
	Title = {Special paraunitary matrices and multidimensional filter banks},
	Volume = {15},
	Year = {2006}}

@article{HenningsTKK:04,
	Author = {P. {Hennings Yeomans} and J. Thornton and J. Kova{\v c}evi{\'c} and B. V. K. V. Kumar},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = optbiometrics,
	Month = feb,
	Number = {5},
	Pages = {637-646},
	Title = {Wavelet packet correlation methods in biometrics},
	Volume = {44},
	Year = 2005}

@incollection{KovacevicV:06,
	Author = {J. Kova{\v c}evi{\'c} and M. Vetterli},
	Booktitle = fundwav,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Editor = {C. Heil and D. Walnut},
	Publisher = pprinceton,
	Title = {Nonseparable Multidimensional Perfect Reconstruction Filter Banks and Wavelet Bases for \protect{${\cal R}^n \ $}},
	Year = {2006}}

@incollection{Kovacevic:06,
	Author = {J. Kova{\v c}evi{\'c}},
	Booktitle = fundwav,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Editor = {C. Heil and D. Walnut},
	Publisher = pprinceton,
	Title = {Introduction to Precursors in Signal Processing},
	Year = {2006}}

@inproceedings{ThorntonHKK:05,
	Address = phil,
	Author = {J. Thornton and P. {Hennings Yeomans} and J. Kova{\v c}evi{\'c} and B. V. K. V. Kumar},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Pages = {81-84},
	Title = {Wavelet packet correlation methods in biometrics},
	Volume = {II},
	Year = {2004}}

@inproceedings{MerrymanKMO:05,
	Address = phil,
	Author = {T. E. Merryman and J. Kova{\v c}evi{\'c} and E. G. Osuna and R. F. Murphy},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Pages = {133-136},
	Title = {Adaptive multirate data acquisition of {3D} cell images},
	Volume = {II},
	Year = {2005}}

@inproceedings{JacquinCJK:05,
	Address = phil,
	Author = {A. Jacquin and E. Causevic and E. R. John and J. Kova{\v c}evi{\'c}},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Pages = {393-396},
	Title = {Adapptive complex wavelet-based filtering of EEG for extraction of evoked potential responses},
	Volume = {V},
	Year = {2004}}

@inproceedings{PueschelK:05,
	Address = snowbird,
	Author = {M. P{\"u}schel and J. Kova{\v c}evi{\'c}},
	Booktitle = dcc,
	Date-Modified = {2007-10-25 19:57:01 -0400},
	Month = mar,
	Pages = {63-72},
	Title = {Real, Tight Frames with Maximal Robustness to Erasures},
	Year = 2005}

@article{MerrymanK:05,
	Author = {T. E. Merryman and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Journal = improcmol,
	Month = sep,
	Number = {9},
	Pages = {1246-1253},
	Title = {Adaptive Multiresolution Acquisition of Fluorescence Microscopy Data Sets},
	Volume = {14},
	Year = {2005}}

@inproceedings{SrinivasaCMK:05,
	Address = baltimore,
	Author = {G. Srinivasa and A. Chebira and T. E. Merryman and J. Kova{\v c}evi{\'c}},
	Booktitle = bmes,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = sep,
	Title = {Adaptive Multiresolution Texture Features for Protein Image Classification},
	Year = {2005}}

@inproceedings{WilliamsMK:05,
	Address = atlanta,
	Author = {K. Williams and T. E. Merryman and J. Kova{\v c}evi{\'c}},
	Booktitle = abrcms,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = nov,
	Title = {A Wavelet Subband Enhancement to Classification},
	Year = {2005}}

@inproceedings{MintosSCK:05,
	Address = atlanta,
	Author = {A. Mintos and G. Srinivasa and A. Chebira and J. Kova{\v c}evi{\'c}},
	Booktitle = abrcms,
	Date-Modified = {2008-03-17 09:26:54 -0400},
	Month = nov,
	Title = {Combining Wavelet Features with {PCA} for Classification of Protein Images},
	Year = {2005}}

@inproceedings{MerrymanWSCK:06,
	Address = arlington,
	Author = {T. E. Merryman and K. Williams and G. Srinivasa and A. Chebira and J. Kova{\v c}evi{\'c}},
	Booktitle = isbi,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = apr,
	Pages = {570-573},
	Title = {A multiresolution enhancement to generic classifiers of subcellular protein location images},
	Year = {2006}}

@inproceedings{CoulotKCMKOM:06,
	Address = arlington,
	Author = {L. Coulot and H. E. Kirschner and A. Chebira and J. M. F. Moura and J. Kova{\v c}evi{\'c} and E. G. Osuna and R. F. Murphy},
	Booktitle = isbi,
	Date-Modified = {2008-03-17 09:23:27 -0400},
	Month = apr,
	Pages = {566-569},
	Title = {Topology preserving {STACS} segmentation of protein subcellular location images},
	Year = {2006}}

@inproceedings{SrinivasaMCMK:06,
	Address = toulouse,
	Author = {G. Srinivasa and T. E. Merryman and A. Chebira and A. Mintos and J. Kova{\v c}evi{\'c}},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:49 -0400},
	Month = may,
	Pages = {1177-1180},
	Title = {Adaptive multiresolution techniques for subcellular protein location image classification},
	Volume = {V},
	Year = {2006}}

@inproceedings{KovacevicP:06a,
	Address = toulouse,
	Author = {J. Kova{\v c}evi{\'c} and M. P{\"u}schel},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = may,
	Pages = {357-360},
	Title = {Sampling Theorems for Trigonometric Transforms},
	Volume = {III},
	Year = {2006}}

@article{KovacevicP:08,
	Author = {J. Kova{\v c}evi{\'c} and M. P{\"u}schel},
	Date-Modified = {2009-04-09 10:06:20 -0400},
	Journal = asp,
	Note = toappear,
	Title = {Algebraic Signal Processing Theory: Sampling for Infinite and Finite {1-D} Space},
	Year = {2009}}

@inproceedings{KovacevicCSCKMOM:06,
	Address = quebec,
	Author = {J. Kova{\v c}evi{\'c} and A. Chebira and G. Srinivasa and L. Coulot and H. E. Kirschner and J. M. F. Moura and E. G. Osuna and R. F. Murphy},
	Booktitle = isac,
	Date-Modified = {2008-03-17 09:23:09 -0400},
	Month = may,
	Title = {Topology preserving {STACS} segmentation of protein subcellular location images},
	Year = {2006}}

@article{ChebiraBJMSMK:07,
	Author = {A. Chebira and Y. Barbotin and C. Jackson and T. E. Merryman and G. Srinivasa and R. F. Murphy and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2009-04-09 13:21:39 -0400},
	Journal = bmc,
	Number = {210},
	Title = {A multiresolution approach to automated classification of protein subcellular location images},
	Volume = {8},
	Year = {2007}}

@webpage{ChebiraBJMSMK:web,
	Author = {A. Chebira and Y. Barbotin and C. Jackson and T. E. Merryman and G. Srinivasa and R. F. Murphy and J. Kova{\v c}evi{\'c}},
	Date-Modified = {2008-06-01 10:15:07 -0400},
	Note = {http://www.andrew.cmu.edu/user/jelenak/Repository/07\_ChebiraBJMSMK/07\_ChebiraBJMSMK.html},
	Title = {A multiresolution approach to automated classification of protein subcellular location images},
	Url = {http://www.andrew.cmu.edu/user/jelenak/Repository/07_ChebiraBJMSMK/07_ChebiraBJMSMK.html},
	Bdsk-Url-1 = {http://www.andrew.cmu.edu/user/jelenak/Repository/07_ChebiraBJMSMK/07_ChebiraBJMSMK.html}}

@article{KovacevicC:07a,
	Author = {J. Kova{\v c}evi{\'c} and A. Chebira},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = aspmag,
	Month = jul,
	Number = {4},
	Pages = {86-104},
	Title = {Life Beyond Bases: The Advent of Frames {(Part I)}},
	Volume = {24},
	Year = {2007}}

@article{KovacevicC:07b,
	Author = {J. Kova{\v c}evi{\'c} and A. Chebira},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Journal = aspmag,
	Month = sep,
	Number = {5},
	Pages = {115-125},
	Title = {Life Beyond Bases: The Advent of Frames {(Part II)}},
	Volume = {24},
	Year = {2007}}

@inproceedings{Kovacevic:07,
	Address = honolulu,
	Author = {J. Kova{\v c}evi{\'c}},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = apr,
	Pages = {1273-1276},
	Title = {How to encourage and publish reproducible research},
	Volume = {IV},
	Year = {2007}}

@inproceedings{ChebiraK:07,
	Address = honolulu,
	Author = {A. Chebira and J. Kova{\v c}evi{\'c}},
	Booktitle = icassp,
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Month = apr,
	Pages = {857-860},
	Title = {Lapped tight frame transforms},
	Volume = {III},
	Year = {2007}}

@inproceedings{KellogCGCZMK:07,
	Address = arlington,
	Author = {R. A. Kellogg and A. Chebira and A. Goyal and P. A. Cuadra and S. F. Zappe and J. S. Minden and J. Kova{\v c}evi{\'c}},
	Booktitle = isbi,
	Date-Modified = {2008-08-07 16:08:47 -0400},
	Month = apr,
	Pages = {288-291},
	Title = {Towards An Image Analysis Toolbox For High-Throughput {D}rosophila Embryo {RNA}i Screens},
	Year = {2007}}

@inproceedings{ChebiraCSLJMHCJPK:07,
	Address = sanantonio,
	Author = {A. Chebira and L. P. Coelho and A. Sandryhaila and S. Lin and W. G. Jenkinson and J. MacSleyne and C. Hoffman and P. Cuadra and C. Jackson and M. P{\"u}schel and J. Kova{\v c}evi{\'c}},
	Booktitle = icip,
	Date-Modified = {2008-01-11 16:10:26 -0500},
	Month = sep,
	Pages = {457 - 460},
	Title = {An Adaptive Multiresolution Approach to Fingerprint Recognition},
	Volume = {1},
	Year = {2007}}

@inproceedings{JacksonMK:07,
	Address = sanantonio,
	Author = {C. Jackson and R. F. Murphy and J. Kova{\v c}evi{\'c}},
	Booktitle = icip,
	Date-Modified = {2008-01-11 16:11:06 -0500},
	Month = sep,
	Pages = {245-248},
	Title = {Efficient acquisition and learning of fluorescence microscopy data models},
	Volume = {6},
	Year = {2007}}

@inproceedings{OzolekCJCKNSOBS:07,
	Address = cairns,
	Author = {J. A. Ozolek and C. A. Castro and W. G. Jenkinson and A. Chebira and J. Kova{\v c}evi{\'c} and C. S. Navara and M. Sukhwani and K. E. Orwig and A. Ben-Yehudah and G. Schatten},
	Booktitle = stemcell,
	Date-Modified = {2007-10-25 19:47:12 -0400},
	Month = jun,
	Title = {Semiquantitative and multiresolution-based histological analysis of germ layer components in teratomas derived from human, non-human primate and mouse embryonic stem cells},
	Year = {2007}}

@article{SrinivasaMK:07,
	Author = {{G. Srinivasa et al.}},
	Date-Modified = {2008-05-29 11:16:33 -0400},
	Journal = bmc,
	Note = tosubmit,
	Optnumber = {210},
	Optvolume = {8},
	Title = {A flexible active contour algorithm for the segmentation of fluorescence microscope cell images},
	Year = {2008}}

@book{KovacevicC:08,
	Author = {J. Kova{\v c}evi{\'c} and A. Chebira},
	Date-Modified = {2008-03-17 09:26:28 -0400},
	Publisher = now,
	Series = {Foundations and Trends in Signal Processing},
	Title = {An Introduction to Frames},
	Year = 2008}

@inproceedings{SrinivasaFK:07,
	Address = sandiego,
	Author = {G. Srinivasa and M. C. Fickus and J. Kova{\v c}evi{\'c}},
	Booktitle = spiew,
	Date-Modified = {2008-01-12 07:51:59 -0500},
	Month = aug,
	Pages = {1-15},
	Title = {Multiscale Active Contour Transformations for the Segmentation of Fluorescence Microscope Images},
	Volume = {6701:18},
	Year = 2007}

@inproceedings{ChebiraK:07a,
	Address = sandiego,
	Author = {A. Chebira and J. Kova{\v c}evi{\'c}},
	Booktitle = spiew,
	Date-Modified = {2008-01-12 07:52:27 -0500},
	Editor = {6701:16},
	Month = aug,
	Title = {Adaptive Multiresolution Frame Classification of Biological and Biometric Images},
	Volume = {1-15},
	Year = 2007}

@inbook{KovacevicR:08,
	Author = {J. Kova{\v c}evi{\'c} and G. K. Rohde},
	Chapter = {Overview of Image Analysis Tools and Tasks for Microscopy},
	Date-Modified = {2007-10-25 19:44:48 -0400},
	Editor = {J. Rittscher and R. Machiraju and {S. T. C.} Wong},
	Publisher = artech,
	Title = {Microscopic Image Analysis for Life Science Applications},
	Year = 2008}

@inproceedings{SandryhailaKP:08,
	Address = lasvegas,
	Author = {A. Sandryhaila and J. Kova{\v c}evi{\'c} and M. P{\"u}schel},
	Booktitle = icassp,
	Date-Modified = {2008-11-21 08:54:45 -0500},
	Month = mar,
	Pages = {3505-3508},
	Title = {Haar Filter Banks for {1-D} Space Signals},
	Year = {2008}}

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	Title = {Designing local orthogonal bases for evaluating image quality},
	Year = {1996}}

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	Year = {1997}}

@misc{p05,
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	Howpublished = ucol,
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	Year = 1991}

@misc{t91b,
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@misc{t91c,
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	Title = {Wavelets and Signal Processing: A Tutorial},
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	Year = 1992}

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	Year = 1993}

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	Year = 1993}

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	Year = 1993}

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	Year = 1994}

@misc{t94b,
	Howpublished = uyale,
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	Year = 1994}

@misc{t94c,
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	Year = 1996}

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	Month = {Winter},
	Note = mh,
	Title = {Wavelets and subband coding},
	Year = {1995-1996}}

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	Year = 1996}

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@misc{t98f,
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@inproceedings{CasazzaRT:08,
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@article{KutyniokPCL:08,
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	Date-Added = {2008-01-17 21:27:29 +0100},
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	Keywords = {open access, citations},
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	School = usouthhampton,
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	Editor = {W. H{\"a}rdle and B. R{\"o}nz},
	Keywords = {reproducible research, sweave},
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@webpage{GPL:91,
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@webpage{OpenSourceLicenses,
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@webpage{Sherpa_Romeo,
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	Keywords = {reproducible research, open access, repositories},
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@webpage{IEEE_OA,
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	Bdsk-Url-1 = {http://www.eprints.org/software/}}

@phdthesis{Vandewalle06,
	Address = lausanne,
	Author = {P. Vandewalle},
	Date-Added = {2008-01-17 21:24:22 +0100},
	Date-Modified = {2008-05-28 21:19:48 +0200},
	Keywords = {super-resolution, image registration, reproducible research},
	Month = jul,
	Note = {No. 3591},
	Reproducible = {http://rr.epfl.ch/6},
	School = epfl,
	Title = {Super-{R}esolution from {U}nregistered {A}liased {I}mages},
	Year = 2006}

@article{SbaizVV:06,
	Author = {L. Sbaiz and P. Vandewalle and M. Vetterli},
	Date-Added = {2008-01-17 21:23:34 +0100},
	Date-Modified = {2008-05-28 21:18:56 +0200},
	Journal = acha,
	Keywords = {super-resolution, groebner basis, aliasing},
	Reproducible = {http://rr.epfl.ch/5},
	Title = {Groebner {B}asis {M}ethods for {M}ultichannel {S}ampling with {U}nknown {O}ffsets},
	Year = 2007}

@article{VandewalleSV:06,
	Author = {P. Vandewalle and S. S{{\"u}}sstrunk and M. Vetterli},
	Date-Added = {2008-01-17 21:22:46 +0100},
	Date-Modified = {2008-05-28 21:20:37 +0200},
	Journal = eurjsp,
	Keywords = {super-resolution, image registration},
	Note = {Article ID 71459, 14 pages},
	Reproducible = {http://rr.epfl.ch/3},
	Title = {A {F}requency {D}omain {A}pproach to {R}egistration of {A}liased {I}mages with {A}pplication to {S}uper-{R}esolution},
	Volume = {2006},
	Year = 2006}

@article{VandewalleSVV:06,
	Author = {P. Vandewalle and L. Sbaiz and J. Vandewalle and M. Vetterli},
	Date-Added = {2008-01-17 21:22:21 +0100},
	Date-Modified = {2008-05-28 21:21:48 +0200},
	Journal = asp,
	Keywords = {super-resolution, sampling},
	Number = {7},
	Pages = {3687-3703},
	Reproducible = {http://rr.epfl.ch/4},
	Title = {Super-{R}esolution from {U}nregistered and {T}otally {A}liased {S}ignals using {S}ubspace {M}ethods},
	Volume = {55},
	Year = 2007}

@inproceedings{Marziliano:07,
	Abstract = {A case study on reproducible research in sampling
theory of signals containing a finite rate of
innovation is the topic of this paper. By building a
solid research which is furthermore reproducible
enables the researcher to build intuition in a
research area and to progress at a much faster
pace. Here, we show that the founding problem of
sampling and exact recontruction of periodic streams
of Dirac pulse will be the basis of the sampling
theory for signals with finite rate of innovation.
The sampling theory can be extended to other signals
such as piecewise polynomials, bandlimited signals
with additive shotnoise and the sum of bandlimited
signals with piecewise polynomial signals. It is
shown that the implementation is based on the one
for streams of Dirac pulses, thus making the new
research reproducible as well.},
	Address = honolulu,
	Author = {P. Marziliano},
	Booktitle = icassp,
	Date-Added = {2008-01-17 21:20:05 +0100},
	Date-Modified = {2008-01-17 21:20:05 +0100},
	Keywords = {reproducible research},
	Local-Url = {/Volumes/vandewal/articles/Marziliano07.pdf},
	Month = apr,
	Pages = {1265-1268},
	Read = {Yes},
	Title = {Reproducible Research: A Case Study of Sampling Signals with Finite Rate of Innovation},
	Volume = {4},
	Year = {2007}}

@inproceedings{VandewalleSDL:07,
	Abstract = {It is the aim of reproducible research to provide
mechanisms for objective comparison of methods,
algorithms, software and procedures in various
research topics. In this paper, we discuss the role
of data sets, benchmarks and competitions in the
fields of system identification, time series
prediction, classification, and pattern recognition
in view of creating an environment of reproducible
research. Important elements are the data sets,
their origin, and the comparison measures that will
be used to rank the performance of the methods. The
issues are discussed, a comparison is made and
recommendations are given.},
	Address = honolulu,
	Author = {J. Vandewalle and J. Suykens and B. De Moor and A. Lendasse},
	Booktitle = icassp,
	Date-Added = {2008-01-17 21:19:56 +0100},
	Date-Modified = {2008-01-26 12:54:02 +0100},
	Keywords = {reproducible research},
	Local-Url = {/Volumes/vandewal/articles/VandewalleSDL07.pdf},
	Month = apr,
	Note = {ftp://ftp.esat.kuleuven.ac.be/pub/SISTA/ida/reports/06-167.pdf},
	Pages = {1269-1272},
	Read = {Yes},
	Title = {State of the Art and Evolutions in Public Data Sets and Competitions for System Identification, Time Series Prediction and Pattern Recognition},
	Url = {ftp://ftp.esat.kuleuven.ac.be/pub/SISTA/ida/reports/06-167.pdf},
	Volume = {4},
	Year = {2007},
	Bdsk-Url-1 = {ftp://ftp.esat.kuleuven.ac.be/pub/SISTA/ida/reports/06-167.pdf}}

@inproceedings{VandewalleBJRV:07,
	Abstract = {How often have you been able to implement an
algorithm as it is described in a paper? And when
you did, were you confident that you had exactly the
same parameter values and results as the authors of
the paper? All too often, articles do not describe
all the details of an algorithm and thus prohibit an
implementation by someone else.  In this paper, we
describe our experience with reproducible research,
a paradigm to allow other people to reproduce with
minimal effort the results we have obtained. We
discuss both the reproducibility of data and
algorithms, and give examples for each of them. The
effort required to make research reproducible is
compensated by a higher visibility and impact of the
results.},
	Address = honolulu,
	Author = {P. Vandewalle and G. Barrenetxea and I. Jovanovic and A. Ridolfi and M. Vetterli},
	Booktitle = icassp,
	Date-Added = {2008-01-17 21:19:38 +0100},
	Date-Modified = {2008-05-28 21:26:36 +0200},
	Keywords = {reproducible research},
	Local-Url = {/Volumes/vandewal/articles/VandewalleBJRV07.pdf},
	Month = apr,
	Note = {http://infoscience.epfl.ch/record/97195},
	Pages = {1253-1256},
	Read = {Yes},
	Title = {Experiences with Reproducible Research in Various Facets of Signal Processing Research},
	Url = {http://infoscience.epfl.ch/record/97195},
	Volume = {4},
	Year = {2007},
	Bdsk-Url-1 = {http://infoscience.epfl.ch/record/97195}}

@inproceedings{BarniPCB:07,
	Abstract = {In this paper the authors analyze how the
description and presentation of results about an
algorithm proposed in the literature should be
modified in order to comply with the Reproducible
Signal Processing paradigm. We describe the problems
one is faced with, by specifically focusing on how
the description of the algorithm should be improved
with respect to the classical approach.},
	Address = honolulu,
	Author = {M. Barni and F. Perez-Gonzalez and P. Comesa{\~n}a and G. Bartoli},
	Booktitle = icassp,
	Date-Added = {2008-01-17 21:19:04 +0100},
	Date-Modified = {2008-01-27 11:42:35 +0100},
	Keywords = {reproducible research},
	Local-Url = {/Volumes/vandewal/articles/BarniPCB07.pdf},
	Month = apr,
	Note = {http://www.gts.tsc.uvigo.es/gpsc/publications/wmark/icassp07reproducible.pdf},
	Pages = {1261-1264},
	Read = {Yes},
	Title = {Putting Reproducible Signal Processing into Practice: A Case Study in Watermarking},
	Url = {http://www.gts.tsc.uvigo.es/gpsc/publications/wmark/icassp07reproducible.pdf},
	Volume = {4},
	Year = {2007},
	Bdsk-Url-1 = {http://www.gts.tsc.uvigo.es/gpsc/publications/wmark/icassp07reproducible.pdf}}

@article{PengDZ:06,
	Annote = {reproducible research and literate programming in
epidemiology. The authors define reproducible
research based on Schwab and Claerbout, and perform
an analysis of the reproducibility of current
epidemiologic research. They discuss different ways
of making data available and giving others
permissions to use them for different goals. Next,
they give a case study. One of the biggest issues is
the disclosure of datasets.},
	Author = {R. D. Peng and F. Dominici and S. L. Zeger},
	Date-Added = {2008-01-17 21:18:51 +0100},
	Date-Modified = {2008-01-26 12:33:07 +0100},
	Journal = amerjepid,
	Keywords = {reproducible research},
	Note = {http://aje.oxfordjournals.org/cgi/content/full/163/9/783},
	Title = {Reproducible {E}pidemiologic {R}esearch},
	Url = {http://aje.oxfordjournals.org/cgi/content/full/163/9/783},
	Year = 2006,
	Bdsk-Url-1 = {http://aje.oxfordjournals.org/cgi/content/full/163/9/783}}

@article{Vinod:01,
	Annote = {Article stating that about 70\% of the articles in a
prestigiuous econometrics journal are not
reproducible.},
	Author = {H. D. Vinod},
	Date-Added = {2008-01-17 21:18:22 +0100},
	Date-Modified = {2008-01-17 21:18:22 +0100},
	Journal = jeconometrics,
	Keywords = {reproducible research, econometrics},
	Month = jan,
	Number = {1},
	Pages = {87-88},
	Title = {Care and feeding of reproducible econometrics},
	Volume = {100},
	Year = 2001}

@techreport{Koenker96,
	Address = urbana,
	Annote = {reproducible research in econometrics. Discusses how
to work in R/S and perform analysis in R, using
possibly Fortran for computationally intensive
parts. Some brief references to reproducible
research, but mainly talking about R/S programming,
and ways to include the output into Latex
documents.},
	Author = {R. Koenker},
	Date-Added = {2008-01-17 21:18:07 +0100},
	Date-Modified = {2008-01-26 12:23:50 +0100},
	Institution = {Department of Econometrics, University of Illinois},
	Keywords = {reproducible research},
	Note = {http://www.econ.uiuc.edu/~roger/research/repro/repro.html},
	Title = {Reproducible {E}conometric {R}esearch},
	Url = {http://www.econ.uiuc.edu/~roger/research/repro/repro.html},
	Year = 1996,
	Bdsk-Url-1 = {http://www.econ.uiuc.edu/~roger/research/repro/repro.html}}

@inproceedings{FomelH07,
	Abstract = {SCons (from Software Construction) is a well-known
opensource program designed primarily for building
software. In this paper, we describe our method of
extending SCons for managing data processing flows
and reproducible computational experiments. We
demonstrate our usage of SCons with a simple
example.},
	Address = honolulu,
	Author = {S. Fomel and G. Hennenfent},
	Booktitle = icassp,
	Date-Added = {2008-01-17 21:17:56 +0100},
	Date-Modified = {2008-01-26 12:15:22 +0100},
	Keywords = {reproducible research},
	Local-Url = {/Volumes/vandewal/articles/FomelH07.pdf},
	Month = apr,
	Note = {http://slim.eos.ubc.ca/Publications/Public/Conferences/ICASSP/2007/fomel07icassp.pdf},
	Pages = {1257-1260},
	Read = {Yes},
	Title = {Reproducible Computational Experiments using SCons},
	Url = {http://slim.eos.ubc.ca/Publications/Public/Conferences/ICASSP/2007/fomel07icassp.pdf},
	Volume = {4},
	Year = {2007},
	Bdsk-Url-1 = {http://slim.eos.ubc.ca/Publications/Public/Conferences/ICASSP/2007/fomel07icassp.pdf}}

@article{PiwowarDF:07,
	Abstract = {Background Sharing research data provides benefit
to the general scientific community, but the benefit
is less obvious for the investigator who makes his
or her data available.  Principal Findings We
examined the citation history of 85 cancer
microarray clinical trial publications with respect
to the availability of their data. The 48\% of
trials with publicly available microarray data
received 85\% of the aggregate citations. Publicly
available data was significantly (p = 0.006)
associated with a 69\% increase in citations,
independently of journal impact factor, date of
publication, and author country of origin using
linear regression.  Significance This correlation
between publicly available data and increased
literature impact may further motivate investigators
to share their detailed research data.  },
	Author = {H. A. Piwowar and R. S. Day and D. B. Fridsma},
	Date-Added = {2008-01-17 21:17:06 +0100},
	Date-Modified = {2008-06-01 10:13:37 -0400},
	Doi = {10.1371/journal.pone.0000308},
	Journal = plos,
	Keywords = {reproducible research, citations, open access},
	Month = mar,
	Note = {http://www.plosone.org/\-article/info:doi/10.1371/journal.pone.0000308},
	Number = {3},
	Pages = {e308},
	Title = {Sharing Detailed Research Data is Associated with Increased Citation Rate},
	Url = {http://www.plosone.org/article/info:doi/10.1371/journal.pone.0000308},
	Volume = {2},
	Year = {2007},
	Bdsk-Url-1 = {http://www.plosone.org/article/info:doi/10.1371/journal.pone.0000308},
	Bdsk-Url-2 = {http://dx.doi.org/10.1371/journal.pone.0000308}}

@article{Lawrence:01,
	Annote = {Comparison between citations of articles available
online and articles that are not online. Online
papers are cited about 3 times more than offline
papers. Also under title {"}Online or
invisible?{"}.},
	Author = {S. Lawrence},
	Date-Added = {2008-01-17 21:16:52 +0100},
	Date-Modified = {2008-01-26 11:54:49 +0100},
	Journal = nature,
	Keywords = {reproducible research, online availability, impact},
	Note = {http://www.nature.com/nature/journal/v411/n6837/full/411521a0.html},
	Number = {6837},
	Pages = {521},
	Title = {Free online availability substantially increases a paper's impact},
	Url = {http://www.nature.com/nature/journal/v411/n6837/full/411521a0.html},
	Volume = {411},
	Year = 2001,
	Bdsk-Url-1 = {http://www.nature.com/nature/journal/v411/n6837/full/411521a0.html}}

@techreport{BuckheitD:95a,
	Annote = {Basic article about reproducible research, the
motivations and practical implementation. This is
demonstrated with examples in WaveLab.},
	Author = {J. Buckheit and D. L. Donoho},
	Date-Added = {2008-01-17 21:16:36 +0100},
	Date-Modified = {2008-01-17 21:16:36 +0100},
	Institution = ustanford,
	Keywords = {reproducible research},
	Local-Url = {/Volumes/vandewal/articles/BuckheitD95.pdf},
	Note = {http://www-stat.stanford.edu/~donoho/Reports/1995/wavelab.pdf},
	Number = {474},
	Title = {Wave{L}ab and {R}eproducible {R}esearch},
	Url = {http://www-stat.stanford.edu/~donoho/Reports/1995/wavelab.pdf},
	Year = 1995,
	Bdsk-Url-1 = {http://www-stat.stanford.edu/~donoho/Reports/1995/wavelab.pdf}}

@webpage{wiki:reproducibility,
	Author = {Wikipedia},
	Date-Added = {2008-01-17 21:16:25 +0100},
	Date-Modified = {2008-06-01 10:48:05 -0400},
	Keywords = {reproducible research},
	Note = {http://en.wikipedia.org/\-w/\-index.php?title=Reproducibility\&oldid=48837772},
	Title = {{Reproducibility --- Wikipedia, The Free Encyclopedia}},
	Url = {http://en.wikipedia.org/w/index.php?title=Reproducibility&oldid=48837772},
	Year = 2006,
	Bdsk-Url-1 = {http://en.wikipedia.org/w/index.php?title=Reproducibility&oldid=48837772}}

@book{CasellaG:01,
	Author = {G. Casella and R. Berger},
	Edition = {Second},
	Publisher = duxberry,
	Title = {Statistical Inference},
	Year = 2001}

@book{SchervishM:95,
	Address = nyc,
	Author = {M. Schervish},
	Publisher = springer,
	Title = {Theory of Statistics},
	Year = 1995}

@article{SchwarzG:78,
	Author = {G. Schwarz},
	Journal = annstat,
	Number = {2},
	Pages = {461-464},
	Title = {Estimating the Dimension of a Model},
	Volume = {6},
	Year = {1978}}

@article{AkaikeH:73,
	Author = {H. Akaike},
	Journal = infosymp,
	Pages = {267-281},
	Title = {Information theory and an extension of the maximum likelihood principle},
	Year = {1973}}

@inproceedings{LakadamyaliM:03,
	Author = {M. Lakadamyali and {M. J.} Rust and {H. P.} Babcock and X. Zhuang},
	Booktitle = nas,
	Number = {16},
	Pages = {9280-9285},
	Title = {Visualizing infection of individual influenza viruses},
	Volume = {100},
	Year = {2003}}

@article{BerzuiniC:97,
	Author = {C. Berzuini and {N. G.} Best and {W. R.} Gilks and C. Larizza},
	Journal = amstat,
	Number = {440},
	Title = {Dynamical Conditional Independence Models and Markov Chain Monte Carlo Methods},
	Volume = {92},
	Year = {1997}}

@techreport{DoucetA:98,
	Address = cambridgeuk,
	Author = {A. Doucet},
	Institution = ucambridge,
	Title = {On Sequential Simulation-Based Methods for Bayesian Filtering},
	Year = {1998}}

@article{StorvikG:02,
	Author = {G. Storvik},
	Journal = asp,
	Number = {2},
	Pages = {281-289},
	Title = {Particle filters for state-space models with the presence ofunknown static parameters},
	Volume = {50},
	Year = {2002}}

@article{GordonN:93,
	Author = {N. Gordon and D. Salmond and A. Smith},
	Journal = {Radar and Signal Processing, IEEE Proceedings},
	Number = {2},
	Pages = {107-113},
	Title = {Novel approach to nonlinear/non-{G}aussian {B}ayesian state estimation},
	Volume = {140},
	Year = {1993}}

@article{MullerP:91,
	Author = {P. Muller},
	Journal = contmath,
	Pages = {145-163},
	Title = {Monte {C}arlo integration in general dynamic models},
	Volume = {115},
	Year = {1991}}

@article{PittM:99,
	Author = {{M. K.} Pitt and N. Shephard},
	Journal = amstat,
	Number = {446},
	Pages = {590-591},
	Title = {Filtering Via Simulation: {A}uxiliary Particle Filters},
	Volume = {94},
	Year = {1999}}

@article{RandW:71,
	Author = {{W. M.} Rand},
	Journal = amstat,
	Number = {336},
	Pages = {846-850},
	Title = {Objective Criteria for the Evaluation of Clustering Methods},
	Volume = {66},
	Year = {1971}}

@article{Arulampalam:02,
	Author = {{M. S.} Arulampalam and S. Maskell and N. Gordon and T. Clapp and D. Sci and T. Organ and {S. A.} Adelaide},
	Journal = asp,
	Number = {2},
	Pages = {174-188},
	Title = {A tutorial on particle filters for online nonlinear/non-{G}aussian {B}ayesian tracking},
	Volume = {50},
	Year = {2002}}

@book{GanG:07,
	Author = {G. Gan and C. Ma and J. Wu},
	Publisher = siam,
	Title = {Data Clustering: Theory, Algorithms, and Applications},
	Year = {2007}}

@article{JainA:99,
	Author = {{A. K.} Jain and {M. N.} Murty and {P. J.} Flynn},
	Journal = acmcompsurv,
	Number = {3},
	Pages = {26-323},
	Publisher = acmpr,
	Title = {Data clustering: {A} review},
	Volume = {31},
	Year = {1999}}

@book{BishopC:06,
	Author = {{C. M.} Bishop},
	Publisher = springer,
	Title = {Pattern recognition and machine learning},
	Year = {2006}}

@article{SatoM:01,
	Author = {M. Sato},
	Journal = neural,
	Number = {7},
	Pages = {1649-1681},
	Publisher = mit,
	Title = {Online Model Selection Based on the Variational Bayes},
	Volume = {13},
	Year = {2001}}

@article{WestM:93,
	Author = {M. West},
	Journal = compscistat,
	Pages = {325-333},
	Title = {Mixture models, {M}onte {C}arlo, {B}ayesian updating and dynamic models},
	Volume = {24},
	Year = {1993}}

@inproceedings{Candes:06,
	Address = madrid,
	Author = {E. J. Cand{\`e}s},
	Booktitle = intcongmath,
	Title = {{Compressive sampling}},
	Year = {2006}}

@book{WestH:97,
	Author = {M. West and J. Harrison},
	Publisher = springer,
	Title = {{Bayesian Forecasting and Dynamic Models}},
	Year = {1997}}

@article{LiangL:94,
	Author = {Z.-P. Liang and P. C. Lauterbur},
	Journal = med,
	Number = {4},
	Pages = {677-686},
	Title = {{An efficient method for dynamic magnetic resonance imaging}},
	Volume = {13},
	Year = {1994}}

@article{PanychOZH:96,
	Author = {L. P. Panych and C. Oesterle and G. P. Zientara and J. Hennig},
	Journal = mri,
	Number = {4},
	Pages = {554-62},
	Title = {{Implementation of a fast gradient-echo SVD encoding technique for dynamic imaging.}},
	Volume = {35},
	Year = {1996}}

@article{TsaoBP:03,
	Author = {J. Tsao and P. Boesiger and K. P. Pruessmann},
	Journal = mri,
	Number = {5},
	Pages = {1031-1042},
	Title = {{kt BLAST and kt SENSE: dynamic MRI with high frame rate exploiting spatiotemporal correlations}},
	Volume = {50},
	Year = {2003}}

@article{AndersonM:05,
	Address = nyc,
	Author = {B. Anderson and A. Moore},
	Journal = machlearnconf,
	Pages = {9-16},
	Publisher = acmpr,
	Title = {{Active learning for hidden markov models: Objective functions and algorithms}},
	Year = {2005}}

@article{CohnAL:94,
	Author = {D. Cohn and L. Atlas and R. Ladner},
	Journal = machlearn,
	Number = {2},
	Pages = {201-221},
	Publisher = springer,
	Title = {{Improving generalization with active learning}},
	Volume = {15},
	Year = {1994}}

@article{LewisG:94,
	Address = nyc,
	Author = {D. D. Lewis and W. A. Gale},
	Journal = {Proc. ACM SIGIR Conf. on research and development in information retrieval},
	Pages = {3-12},
	Publisher = sv,
	Title = {{A sequential algorithm for training text classifiers}},
	Year = {1994}}

@article{SeungOS:92,
	Address = nyc,
	Author = {H. S. Seung and M. Opper and H. Sompolinsky},
	Journal = complearn,
	Pages = {287-294},
	Publisher = acmpr,
	Title = {Query by committee},
	Year = {1992}}

@article{Baraniuk:07,
	Author = {R. G. Baraniuk},
	Journal = aspmag,
	Number = {4},
	Pages = {118-121},
	Title = {{Compressive Sensing}},
	Volume = {24},
	Year = {2007}}

@article{HoebeVGDVM:07,
	Author = {R. A. Hoebe and C. H. Van Oven and T. W. Gadella Jr and P. B. Dhonukshe and C. J. Van Noorden and E. M. Manders},
	Journal = naturebiotech,
	Number = {2},
	Pages = {249-53},
	Title = {{Controlled light-exposure microscopy reduces photobleaching and phototoxicity in fluorescence live-cell imaging.}},
	Volume = {25},
	Year = {2007}}

@article{StephensA:03,
	Author = {D. J. Stephens and V. J. Allan},
	Journal = science,
	Number = {5616},
	Pages = {82},
	Publisher = {AAAS},
	Title = {{Light Microscopy Techniques for Live Cell Imaging}},
	Volume = {300},
	Year = {2003}}

@book{GoldmanS:04,
	Author = {Goldman, R.D. and Spector, D.L.},
	Publisher = cshl,
	Title = {Live Cell Imaging: A Laboratory Manual},
	Year = 2004}